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» The efficiency of algorithms - misconceptions
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139
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BMCBI
2006
109views more  BMCBI 2006»
15 years 5 months ago
HaploRec: efficient and accurate large-scale reconstruction of haplotypes
Background: Haplotypes extracted from human DNA can be used for gene mapping and other analysis of genetic patterns within and across populations. A fundamental problem is, howeve...
Lauri Eronen, Floris Geerts, Hannu Toivonen
165
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ENTCS
2006
137views more  ENTCS 2006»
15 years 5 months ago
An Efficient Method for Computing Exact State Space of Petri Nets With Stopwatches
In this paper, we address the issue of the formal verification of real-time systems in the context of a preemptive scheduling policy. We propose an algorithm which computes the st...
Morgan Magnin, Didier Lime, Olivier H. Roux
145
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JCB
2008
122views more  JCB 2008»
15 years 4 months ago
Space Efficient Computation of Rare Maximal Exact Matches between Multiple Sequences
In this article, we propose a new method for computing rare maximal exact matches between multiple sequences. A rare match between k sequences S1; : : :; Sk is a string that occur...
Enno Ohlebusch, Stefan Kurtz
ICMS
2010
15 years 2 months ago
Efficient Evaluation of Large Polynomials
Abstract. Minimizing the evaluation cost of a polynomial expression is a fundamental problem in computer science. We propose tools that, for a polynomial P given as the sum of its ...
Charles E. Leiserson, Liyun Li, Marc Moreno Maza, ...
ICPR
2010
IEEE
15 years 2 months ago
Efficient Polygonal Approximation of Digital Curves via Monte Carlo Optimization
A novel stochastic searching scheme based on the Monte Carlo optimization is presented for polygonal approximation (PA) problem. We propose to combine the split-and-merge based lo...
Xiuzhuang Zhou, Yao Lu