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COCOON
2006
Springer
15 years 6 months ago
Reconciling Gene Trees with Apparent Polytomies
We consider the problem of reconciling gene trees with a species tree based on the widely accepted Gene Duplication model from Goodman et al. Current algorithms that solve this pro...
Wen-Chieh Chang 0002, Oliver Eulenstein
132
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GECCO
2006
Springer
137views Optimization» more  GECCO 2006»
15 years 6 months ago
A unified optimization framework for microelectronics industry
In this paper, an object-oriented unified optimization framework (UOF) for general problem optimization is proposed. Based on evolutionary algorithms, numerical deterministic meth...
Yiming Li, Cheng-Kai Chen, Yen-Yu Cho
129
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WOB
2004
134views Bioinformatics» more  WOB 2004»
15 years 4 months ago
Reconstruction of Phylogenetic Trees using the Ant Colony Optimization Paradigm
We developed a new approach for the reconstruction of phylogenetic trees using ant colony optimization metaheuristics.Atree is constructed using a fully connected graph and the pro...
Heitor S. Lopes, Mauricio Perretto
BIOCOMP
2009
15 years 3 months ago
Evidence against the Paradigm of Energy Minimization in Protein Design
Abstract-- Stating protein design as an energy minimization in the space of amino acid sequences and rotamer combinations is usual. In the current paper an evolutionary algorithm b...
Andrea Bazzoli, Andrea Tettamanzi
HM
2010
Springer
157views Optimization» more  HM 2010»
15 years 3 months ago
Hybrid Heuristics for Dynamic Resource-Constrained Project Scheduling Problem
Dynamic Resource-Constrained Project Scheduling Problem (DRCPSP) is a scheduling problem that works with an uncommon kind of resources: the Dynamic Resources. They increase and dec...
André Renato Villela da Silva, Luiz Satoru ...