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105
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TCBB
2010
137views more  TCBB 2010»
14 years 9 months ago
Alignments of RNA Structures
— We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supe...
Guillaume Blin, Alain Denise, Serge Dulucq, Claire...
JMLR
2010
92views more  JMLR 2010»
14 years 5 months ago
Posterior distributions are computable from predictive distributions
As we devise more complicated prior distributions, will inference algorithms keep up? We highlight a negative result in computable probability theory by Ackerman, Freer, and Roy (...
Cameron E. Freer, Daniel M. Roy
105
Voted
ACL
2012
13 years 1 months ago
Post-ordering by Parsing for Japanese-English Statistical Machine Translation
Reordering is a difficult task in translating between widely different languages such as Japanese and English. We employ the postordering framework proposed by (Sudoh et al., 201...
Isao Goto, Masao Utiyama, Eiichiro Sumita
AAAI
2007
15 years 1 months ago
A Randomized String Kernel and Its Application to RNA Interference
String kernels directly model sequence similarities without the necessity of extracting numerical features in a vector space. Since they better capture complex traits in the seque...
Shibin Qiu, Terran Lane, Ljubomir J. Buturovic
BIOINFORMATICS
2010
87views more  BIOINFORMATICS 2010»
14 years 11 months ago
Improving protein secondary structure prediction using a simple k-mer model
Motivation: Existing methods for protein sequence analysis are generally firstorder and inherently assume that each position is independent. We develop a general framework for int...
Martin Madera, Ryan Calmus, Grant Thiltgen, Kevin ...