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» The existence of k-radius sequences
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CCE
2005
14 years 11 months ago
Synthesis of separation processes by case-based reasoning
A new approach to separation process synthesis and selection of single separations is presented. The method is based on the reuse of existing design cases by case-based reasoning ...
Timo Seuranen, Markku Hurme, Elina Pajula
BMCBI
2010
175views more  BMCBI 2010»
14 years 11 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
EVOW
2010
Springer
14 years 9 months ago
Finding Gapped Motifs by a Novel Evolutionary Algorithm
Background: Identifying approximately repeated patterns, or motifs, in DNA sequences from a set of co-regulated genes is an important step towards deciphering the complex gene reg...
Chengwei Lei, Jianhua Ruan
RECOMB
2001
Springer
15 years 11 months ago
Finding motifs using random projections
motif discovery problem abstracts the task of discovering short, conserved sites in genomic DNA. Pevzner and Sze recently described a precise combinatorial formulation of motif di...
Jeremy Buhler, Martin Tompa
KDD
2004
ACM
144views Data Mining» more  KDD 2004»
15 years 11 months ago
IncSpan: incremental mining of sequential patterns in large database
Many real life sequence databases, such as customer shopping sequences, medical treatment sequences, etc., grow incrementally. It is undesirable to mine sequential patterns from s...
Hong Cheng, Xifeng Yan, Jiawei Han