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RECOMB
2007
Springer
15 years 3 months ago
Network Legos: Building Blocks of Cellular Wiring Diagrams
Publicly-available data sets provide detailed and large-scale information on multiple types of molecular interaction networks in a number of model organisms. These multi-modal univ...
T. M. Murali, Corban G. Rivera
ACL
2009
14 years 7 months ago
A Novel Discourse Parser Based on Support Vector Machine Classification
This paper introduces a new algorithm to parse discourse within the framework of Rhetorical Structure Theory (RST). Our method is based on recent advances in the field of statisti...
David duVerle, Helmut Prendinger
ICML
2010
IEEE
14 years 10 months ago
Proximal Methods for Sparse Hierarchical Dictionary Learning
We propose to combine two approaches for modeling data admitting sparse representations: on the one hand, dictionary learning has proven effective for various signal processing ta...
Rodolphe Jenatton, Julien Mairal, Guillaume Obozin...
CMSB
2003
Springer
15 years 2 months ago
An Overview of Data Models for the Analysis of Biochemical Pathways
Biochemical pathways such as metabolic, regulatory or signal tranduction pathways can be viewed as interconnected processes forming an intricate network of functional and physical...
Yves Deville, David Gilbert, Jacques van Helden, S...
RECOMB
2008
Springer
15 years 10 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...