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127
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TCAD
2008
195views more  TCAD 2008»
15 years 11 days ago
Multilayer Obstacle-Avoiding Rectilinear Steiner Tree Construction Based on Spanning Graphs
Given a set of pins and a set of obstacles on routing layers, a multilayer obstacle-avoiding rectilinear Steiner minimal tree (ML-OARSMT) connects these pins by rectilinear edges w...
Chung-Wei Lin, Shih-Lun Huang, Kai-Chi Hsu, Meng-X...
94
Voted
BMCBI
2005
77views more  BMCBI 2005»
15 years 11 days ago
Ontological visualization of protein-protein interactions
Background: Cellular processes require the interaction of many proteins across several cellular compartments. Determining the collective network of such interactions is an importa...
Harold J. Drabkin, Christopher Hollenbeck, David P...
85
Voted
BMCBI
2005
89views more  BMCBI 2005»
15 years 11 days ago
Comparative analysis of chromatin landscape in regulatory regions of human housekeeping and tissue specific genes
Background: Global regulatory mechanisms involving chromatin assembly and remodelling in the promoter regions of genes is implicated in eukaryotic transcription control especially...
Mythily Ganapathi, Pragya Srivastava, Sushanta Kum...
102
Voted
BMCBI
2005
126views more  BMCBI 2005»
15 years 11 days ago
Integrative analysis of multiple gene expression profiles with quality-adjusted effect size models
Background: With the explosion of microarray studies, an enormous amount of data is being produced. Systematic integration of gene expression data from different sources increases...
Pingzhao Hu, Celia M. T. Greenwood, Joseph Beyene
BMCBI
2005
87views more  BMCBI 2005»
15 years 11 days ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...