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BMCBI
2006
112views more  BMCBI 2006»
15 years 6 months ago
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
Background: Hidden Markov Models (HMMs) have been extensively used in computational molecular biology, for modelling protein and nucleic acid sequences. In many applications, such...
Pantelis G. Bagos, Theodore D. Liakopoulos, Stavro...
COR
2007
81views more  COR 2007»
15 years 6 months ago
Job scheduling methods for reducing waiting time variance
Minimizing Waiting Time Variance (WTV) is a job scheduling problem where we schedule a batch of n jobs, for servicing on a single resource, in such a way that the variance of thei...
Nong Ye, Xueping Li, Toni Farley, Xiaoyun Xu
CORR
2007
Springer
90views Education» more  CORR 2007»
15 years 6 months ago
Discrete Denoising with Shifts
We introduce S-DUDE, a new algorithm for denoising Discrete Memoryless Channel (DMC)-corrupted data. The algorithm, which generalizes the recently introduced DUDE (Discrete Univer...
Taesup Moon, Tsachy Weissman
JEA
2008
97views more  JEA 2008»
15 years 6 months ago
Approximating the true evolutionary distance between two genomes
As more and more genomes are sequenced, evolutionary biologists are becoming increasingly interested in evolution at the level of whole genomes, in scenarios in which the genome e...
Krister M. Swenson, Mark Marron, Joel V. Earnest-D...
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JACM
2006
93views more  JACM 2006»
15 years 6 months ago
Combining expert advice in reactive environments
"Experts algorithms" constitute a methodology for choosing actions repeatedly, when the rewards depend both on the choice of action and on the unknown current state of t...
Daniela Pucci de Farias, Nimrod Megiddo