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GECCO
2000
Springer
142views Optimization» more  GECCO 2000»
15 years 1 months ago
Improving EAs for Sequencing Problems
Sequencing problems have to be solved very often in VLSI CAD. To obtain results of high quality, Evolutionary Algorithms (EAs) have been successfully applied in many cases. Howeve...
Wolfgang Günther, Rolf Drechsler
HPDC
2006
IEEE
15 years 4 months ago
Path Grammar Guided Trace Compression and Trace Approximation
Trace-driven simulation is an important technique used in the evaluation of computer architecture innovations. However using it for studying parallel computers and applications is...
Xiaofeng Gao, Allan Snavely, Larry Carter
IJIT
2004
14 years 11 months ago
Computing Entropy for Ortholog Detection
Abstract-- Biological sequences from different species are called orthologs if they evolved from a sequence of a common ancestor species and they have the same biological function....
Hsing-Kuo Pao, John Case
BMEI
2008
IEEE
15 years 4 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang
RECOMB
2000
Springer
15 years 1 months ago
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm
In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
Franco P. Preparata, Eli Upfal