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BMCBI
2006
155views more  BMCBI 2006»
14 years 10 months ago
AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data
Background: DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challeng...
Guoqing Lu, The V. Nguyen, Yuannan Xia, Michael Fr...
BIOINFORMATICS
2010
127views more  BIOINFORMATICS 2010»
14 years 10 months ago
Analyzing taxonomic classification using extensible Markov models
Motivation: As next generation sequencing is rapidly adding new genomes, their correct placement in the taxonomy needs verification. However, the current methods for confirming cl...
Rao M. Kotamarti, Michael Hahsler, Douglas Raiford...
BMCBI
2007
104views more  BMCBI 2007»
14 years 10 months ago
Comparative evaluation of gene-set analysis methods
Background: Multiple data-analytic methods have been proposed for evaluating gene-expression levels in specific biological pathways, assessing differential expression associated w...
Qi Liu, Irina Dinu, Adeniyi J. Adewale, John D. Po...
CIKM
2006
Springer
15 years 1 months ago
Ranking robustness: a novel framework to predict query performance
In this paper, we introduce the notion of ranking robustness, which refers to a property of a ranked list of documents that indicates how stable the ranking is in the presence of ...
Yun Zhou, W. Bruce Croft
IPM
2008
92views more  IPM 2008»
14 years 10 months ago
Searching strategies for the Hungarian language
This paper reports on the underlying IR problems encountered when dealing with the complex morphology and compound constructions found in the Hungarian language. It describes evalu...
Jacques Savoy