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BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
Fast-Find: A novel computational approach to analyzing combinatorial motifs
Background: Many vital biological processes, including transcription and splicing, require a combination of short, degenerate sequence patterns, or motifs, adjacent to defined seq...
Micah Hamady, Erin Peden, Rob Knight, Ravinder Sin...
IJHPCA
2006
99views more  IJHPCA 2006»
14 years 9 months ago
A Pragmatic Analysis Of Scheduling Environments On New Computing Platforms
Today, large scale parallel systems are available at relatively low cost. Many powerful such systems have been installed all over the world and the number of users is always incre...
Lionel Eyraud
CLUSTER
2007
IEEE
15 years 4 months ago
Optimal synchronization frequency for dynamic pipelined computations on heterogeneous systems
— In this paper we give a theoretical model for determining the synchronization frequency that minimizes the parallel execution time of loops with uniform dependencies dynamicall...
Florina M. Ciorba, Ioannis Riakiotakis, Theodore A...
CAD
2007
Springer
14 years 9 months ago
Computing general geometric structures on surfaces using Ricci flow
Systematically generalizing planar geometric algorithms to manifold domains is of fundamental importance in computer aided design field. This paper proposes a novel theoretic fra...
Miao Jin, Feng Luo 0002, Xianfeng David Gu
IJES
2006
72views more  IJES 2006»
14 years 9 months ago
System-level parallelism and concurrency maximisation in reconfigurable computing applications
: Reconfigurable Computers can leverage the synergism between conventional processors and FPGAs to provide both hardware functionalities and general-purpose computers flexibility. ...
Esam El-Araby, Mohamed Taher, Kris Gaj, Tarek A. E...