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BMCBI
2002
108views more  BMCBI 2002»
15 years 17 days ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
ECAI
2010
Springer
15 years 28 days ago
Optimal Task Migration in Service-Oriented Systems: Algorithms and Mechanisms
In service-oriented systems, such as grids and clouds, users are able to outsource complex computational tasks by procuring resources on demand from remote service providers. As th...
Sebastian Stein, Enrico Gerding, Nicholas R. Jenni...
101
Voted
CDC
2010
IEEE
102views Control Systems» more  CDC 2010»
14 years 7 months ago
Stock market trading via stochastic network optimization
We consider the problem of dynamic buying and selling of shares from a collection of N stocks with random price fluctuations. To limit investment risk, we place an upper bound on t...
Michael J. Neely
107
Voted
SODA
1994
ACM
138views Algorithms» more  SODA 1994»
15 years 2 months ago
Average Case Analysis of Dynamic Geometric Optimization
We maintain the maximum spanning tree of a planar point set, as points are inserted or deleted, in O(log3 n) time per update in Mulmuley's expected-case model of dynamic geom...
David Eppstein
101
Voted
TOC
2008
94views more  TOC 2008»
15 years 19 days ago
Optimal lower bounds for the Korkine-Zolotareff parameters of a lattice and for Schnorr's algorithm for the shortest vector prob
Abstract: Schnorr's algorithm for finding an approximation for the shortest nonzero vector in an n-dimensional lattice depends on a parameter k. He proved that for a fixed k ...
Miklós Ajtai