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» Time Series Analysis of Gene Expression and Location Data
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BMCBI
2007
148views more  BMCBI 2007»
14 years 9 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...
BIOCOMP
2006
14 years 11 months ago
Computational Inference of Compound-induced Anti-inflammatory Effects Across Time in an Adjuvant-induced Arthritis Rat Model
A number of diseases, such as arthritis and cardiovascular disorders impacting the lives of many people have strong inflammatory components. To elucidate the antiinflammatory mecha...
Jing Yu, Gabriel Helmlinger, Muriel Saulnier, Anna...
BMCBI
2008
136views more  BMCBI 2008»
14 years 9 months ago
GPAT: Retrieval of genomic annotation from large genomic position datasets
Background: Recent genome wide transcription factor binding site or chromatin modification mapping analysis techniques, such as chromatin immunoprecipitation (ChIP) linked to DNA ...
Arnaud Krebs, Mattia Frontini, Làszlò...
CMSB
2006
Springer
15 years 1 months ago
Regulatory Network Reconstruction Using Stochastic Logical Networks
Abstract. This paper presents a method for regulatory network reconstruction from experimental data. We propose a mathematical model for regulatory interactions, based on the work ...
Bartek Wilczynski, Jerzy Tiuryn

Publication
412views
16 years 7 months ago
Analyzing Transit Service Reliability using Detailed Data From Automatic Vehicular Locator Systems
The widespread adoption of automated vehicle location systems (AVL) and automatic passenger counters (APC) in the transit industry has opened new venues in operations and system mo...
A. M. El-Geneidy, J. Horning, K. J. Krizek