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» Time Series Analysis of Gene Expression and Location Data
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ALIFE
1998
14 years 9 months ago
The Perfect C. elegans Project: An Initial Report
The soil nematode Caenorhabditis Elegans (C. elegans) is the most investigated of all multi-cellular organisms. Since the proposal to use it as a model organism, a series of resea...
Hiroaki Kitano, Shugo Hamahashi, Sean Luke
PVLDB
2008
163views more  PVLDB 2008»
14 years 9 months ago
C-DEM: a multi-modal query system for Drosophila Embryo databases
The amount of biological data publicly available has experienced an exponential growth as the technology advances. Online databases are now playing an important role as informatio...
Fan Guo, Lei Li, Christos Faloutsos, Eric P. Xing
77
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BMCBI
2007
145views more  BMCBI 2007»
14 years 9 months ago
The utility of MAS5 expression summary and detection call algorithms
Background: Used alone, the MAS5.0 algorithm for generating expression summaries has been criticized for high False Positive rates resulting from exaggerated variance at low inten...
Stuart D. Pepper, Emma K. Saunders, Laura E. Edwar...
BMCBI
2007
215views more  BMCBI 2007»
14 years 9 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer
BMCBI
2007
107views more  BMCBI 2007»
14 years 9 months ago
Linking microarray reporters with protein functions
Background: The analysis of microarray experiments requires accurate and up-to-date functional annotation of the microarray reporters to optimize the interpretation of the biologi...
Stan Gaj, Arie van Erk, Rachel I. M. van Haaften, ...