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» Time Series Prediction Based on Gene Expression Programming
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BMCBI
2010
118views more  BMCBI 2010»
14 years 12 months ago
Bacillus anthracis genome organization in light of whole transcriptome sequencing
Emerging knowledge of whole prokaryotic transcriptomes could validate a number of theoretical concepts introduced in the early days of genomics. What are the rules connecting gene...
Jeffrey Martin, Wenhan Zhu, Karla D. Passalacqua, ...
CLUSTER
2002
IEEE
14 years 11 months ago
Online Prediction of the Running Time of Tasks
Abstract. We describe and evaluate the Running Time Advisor (RTA), a system that can predict the running time of a compute-bound task on a typical shared, unreserved commodity host...
Peter A. Dinda
BMCBI
2004
158views more  BMCBI 2004»
14 years 11 months ago
Incremental genetic K-means algorithm and its application in gene expression data analysis
Background: In recent years, clustering algorithms have been effectively applied in molecular biology for gene expression data analysis. With the help of clustering algorithms suc...
Yi Lu, Shiyong Lu, Farshad Fotouhi, Youping Deng, ...
CMSB
2006
Springer
15 years 3 months ago
Regulatory Network Reconstruction Using Stochastic Logical Networks
Abstract. This paper presents a method for regulatory network reconstruction from experimental data. We propose a mathematical model for regulatory interactions, based on the work ...
Bartek Wilczynski, Jerzy Tiuryn
BMCBI
2006
136views more  BMCBI 2006»
14 years 11 months ago
EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences
Background: Understanding gene regulatory networks has become one of the central research problems in bioinformatics. More than thirty algorithms have been proposed to identify DN...
Jianjun Hu, Yifeng D. Yang, Daisuke Kihara