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108
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BMCBI
2007
106views more  BMCBI 2007»
15 years 23 days ago
Simultaneous identification of long similar substrings in large sets of sequences
Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
Jürgen Kleffe, Friedrich Möller, Burghar...
118
Voted
BMCBI
2008
115views more  BMCBI 2008»
15 years 26 days ago
PARPST: a PARallel algorithm to find peptide sequence tags
Background: Protein identification is one of the most challenging problems in proteomics. Tandem mass spectrometry provides an important tool to handle the protein identification ...
Sara Brunetti, Elena Lodi, Elisa Mori, Maria Stell...
94
Voted
WSC
2008
15 years 3 months ago
Maximizing the utilization of operating rooms with stochastic times using simulation
This paper addresses a surgery rooms scheduling problem. The problem is modeled as a parallel machine scheduling problem with sequence dependent setup times and an objective of mi...
Jean-Paul M. Arnaout, Sevag Kulbashian
123
Voted
VISUALIZATION
1996
IEEE
15 years 4 months ago
Flexible Information Visualization of Multivariate Data from Biological Sequence Similarity Searches
Information visualization faces challenges presented by the need to represent abstract data and the relationships within the data. Previously, we presented a system for visualizin...
Ed Huai-hsin Chi, John Riedl, Elizabeth Shoop, Joh...
137
Voted
KDD
2012
ACM
217views Data Mining» more  KDD 2012»
13 years 3 months ago
The long and the short of it: summarising event sequences with serial episodes
An ideal outcome of pattern mining is a small set of informative patterns, containing no redundancy or noise, that identifies the key structure of the data at hand. Standard freq...
Nikolaj Tatti, Jilles Vreeken