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112
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BMCBI
2010
147views more  BMCBI 2010»
15 years 26 days ago
Automatic detection of anchor points for multiple sequence alignment
Background: Determining beforehand specific positions to align (anchor points) has proved valuable for the accuracy of automated multiple sequence alignment (MSA) software. This f...
Florian Pitschi, Claudine Devauchelle, Eduardo Cor...
110
Voted
BMCBI
2008
137views more  BMCBI 2008»
15 years 26 days ago
Evading the annotation bottleneck: using sequence similarity to search non-sequence gene data
Background: Non-sequence gene data (images, literature, etc.) can be found in many different public databases. Access to these data is mostly by text based methods using gene name...
Michael J. Gilchrist, Mikkel B. Christensen, Richa...
JAPLL
2008
91views more  JAPLL 2008»
15 years 23 days ago
Undoing the effects of action sequences
In this paper, we study the following basic problem: After having executed a sequence of actions, find a sequence of actions that brings the agent back to the state just before th...
Thomas Eiter, Esra Erdem, Wolfgang Faber
144
Voted
BMCBI
2008
128views more  BMCBI 2008»
15 years 11 days ago
In silico analysis of expressed sequence tags from Trichostrongylus vitrinus (Nematoda): comparison of the automated ESTExplorer
Background: The analysis of expressed sequence tags (EST) offers a rapid and cost effective approach to elucidate the transcriptome of an organism, but requires several computatio...
Shivashankar H. Nagaraj, Robin B. Gasser, Alasdair...
PPAM
2001
Springer
15 years 5 months ago
Estimating Execution Time of Distributed Applications
In this work we consider the problem of estimating execution time of distributed applications. The main difficulty stems from the communication delays and shared nature of the comp...
Maciej Drozdowski