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WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
15 years 10 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
111
Voted
EDCC
1999
Springer
15 years 7 months ago
Considering Workload Input Variations in Error Coverage Estimation
The effects of variations in the workload input when estimating error detection coverage using fault injection are investigated. Results from scanchain implemented fault injection ...
Peter Folkesson, Johan Karlsson
113
Voted
DCC
2004
IEEE
16 years 3 months ago
Discrete Universal Filtering Through Incremental Parsing
In the discrete filtering problem, a data sequence over a finite alphabet is assumed to be corrupted by a discrete memoryless channel. The goal is to reconstruct the clean sequenc...
Erik Ordentlich, Tsachy Weissman, Marcelo J. Weinb...
202
Voted
SIGMOD
2007
ACM
169views Database» more  SIGMOD 2007»
16 years 3 months ago
Genome-scale disk-based suffix tree indexing
With the exponential growth of biological sequence databases, it has become critical to develop effective techniques for storing, querying, and analyzing these massive data. Suffi...
Benjarath Phoophakdee, Mohammed J. Zaki
114
Voted
ICRA
2010
IEEE
88views Robotics» more  ICRA 2010»
15 years 2 months ago
Relaxed optimization for mode estimation in skid steering
— Skid-steered vehicles, by design, must skid in order to maneuver. The skidding causes the vehicle to behave discontinuously as well as introduces complications to the observati...
Timothy M. Caldwell, Todd D. Murphey