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BMCBI
2008
169views more  BMCBI 2008»
15 years 4 months ago
CompMoby: Comparative MobyDick for detection of cis-regulatory motifs
Background: The regulation of gene expression is complex and occurs at many levels, including transcriptional and post-transcriptional, in metazoans. Transcriptional regulation is...
Christina Chaivorapol, Collin Melton, Grace Wei, R...
132
Voted
CANDC
2004
ACM
15 years 4 months ago
iProLINK: an integrated protein resource for literature mining
The exponential growth of large-scale molecular sequence data and of the PubMed scientific literature has prompted active research in biological literature mining and information ...
Zhang-Zhi Hu, Inderjeet Mani, Vincent Hermoso, Hon...
164
Voted
BMCBI
2010
123views more  BMCBI 2010»
14 years 11 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
AMR
2005
Springer
137views Multimedia» more  AMR 2005»
15 years 9 months ago
Information Retrieval of Sequential Data in Heterogeneous XML Databases
The XML language is a W3C standard sustained by both the industry and the scientific community. Therefore, the available information annotated in XML keeps and will keep increasing...
Eugen Popovici, Pierre-Francois Marteau, Gildas M&...
ICDE
2006
IEEE
188views Database» more  ICDE 2006»
16 years 5 months ago
Efficiently Evaluating Order Preserving Similarity Queries over Historical Market-Basket Data
We introduce a new domain-independent framework for formulating and efficiently evaluating similarity queries over historical data, where given a history as a sequence of timestam...
Reza Sherkat, Davood Rafiei