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VLSID
2002
IEEE
92views VLSI» more  VLSID 2002»
16 years 4 months ago
Electromigration Avoidance in Analog Circuits: Two Methodologies for Current-Driven Routing
Interconnect with an insufficient width may be subject to electromigration and eventually cause the failure of the circuit at any time during its lifetime. This problem has gotten...
Jens Lienig, Goeran Jerke, Thorsten Adler
RECOMB
2008
Springer
16 years 4 months ago
Ancestral Reconstruction by Asymmetric Wagner Parsimony over Continuous Characters and Squared Parsimony over Distributions
Abstract. Contemporary inferences about evolution occasionally involve analyzing infinitely large feature spaces, requiring specific algorithmic techniques. We consider parsimony a...
Miklós Csürös
EDBT
2006
ACM
136views Database» more  EDBT 2006»
16 years 4 months ago
Optimizing Monitoring Queries over Distributed Data
Scientific data in the life sciences is distributed over various independent multi-format databases and is constantly expanding. We discuss a scenario where a life science research...
Frank Neven, Dieter Van de Craen
GCB
2009
Springer
180views Biometrics» more  GCB 2009»
15 years 10 months ago
2D Projections of RNA Folding Landscapes
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...
Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker
BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
15 years 10 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uniï...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara