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BMCBI
2010
108views more  BMCBI 2010»
15 years 4 months ago
Confronting two-pair primer design for enzyme-free SNP genotyping based on a genetic algorithm
Background: Polymerase chain reaction with confronting two-pair primers (PCR-CTPP) method produces allelespecific DNA bands of different lengths by adding four designed primers an...
Cheng-Hong Yang, Yu-Huei Cheng, Li-Yeh Chuang, Hsu...
BMCBI
2008
218views more  BMCBI 2008»
15 years 4 months ago
LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method
Background: Testing for selection is becoming one of the most important steps in the analysis of multilocus population genetics data sets. Existing applications are difficult to u...
Tiago Antao, Ana Lopes, Ricardo J. Lopes, Albano B...
BMCBI
2008
108views more  BMCBI 2008»
15 years 4 months ago
SPRINT: A new parallel framework for R
Background: Microarray analysis allows the simultaneous measurement of thousands to millions of genes or sequences across tens to thousands of different samples. The analysis of t...
Jon Hill, Matthew Hambley, Thorsten Forster, Murie...
CORR
2010
Springer
162views Education» more  CORR 2010»
15 years 4 months ago
Random sampling of lattice paths with constraints, via transportation
We investigate Monte Carlo Markov Chain (MCMC) procedures for the random sampling of some one-dimensional lattice paths with constraints, for various constraints. We will see that...
Lucas Gerin
DAM
2008
90views more  DAM 2008»
15 years 4 months ago
Polarity of chordal graphs
Polar graphs are a common generalization of bipartite, cobipartite, and split graphs. They are defined by the existence of a certain partition of vertices, which is NPcomplete to ...
Tinaz Ekim, Pavol Hell, Juraj Stacho, Dominique de...