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BMCBI
2007
164views more  BMCBI 2007»
15 years 4 months ago
Comparison of probabilistic Boolean network and dynamic Bayesian network approaches for inferring gene regulatory networks
Background: The regulation of gene expression is achieved through gene regulatory networks (GRNs) in which collections of genes interact with one another and other substances in a...
Peng Li, Chaoyang Zhang, Edward J. Perkins, Ping G...
ASE
2005
137views more  ASE 2005»
15 years 4 months ago
Rewriting-Based Techniques for Runtime Verification
Techniques for efficiently evaluating future time Linear Temporal Logic (abbreviated LTL) formulae on finite execution traces are presented. While the standard models of LTL are i...
Grigore Rosu, Klaus Havelund
IPM
2007
105views more  IPM 2007»
15 years 4 months ago
Parsimonious translation models for information retrieval
In the KL divergence framework, the extended language modeling approach has a critical problem estimating a query model, which is the probabilistic model that encodes user’s inf...
Seung-Hoon Na, In-Su Kang, Jong-Hyeok Lee
BMCBI
2005
132views more  BMCBI 2005»
15 years 4 months ago
Kalign - an accurate and fast multiple sequence alignment algorithm
Background: The alignment of multiple protein sequences is a fundamental step in the analysis of biological data. It has traditionally been applied to analyzing protein families f...
Timo Lassmann, Erik L. L. Sonnhammer
BMCBI
2005
306views more  BMCBI 2005»
15 years 4 months ago
A method for aligning RNA secondary structures and its application to RNA motif detection
Background: Alignment of RNA secondary structures is important in studying functional RNA motifs. In recent years, much progress has been made in RNA motif finding and structure a...
Jianghui Liu, Jason Tsong-Li Wang, Jun Hu, Bin Tia...