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BMCBI
2006
93views more  BMCBI 2006»
15 years 4 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
BMCBI
2005
246views more  BMCBI 2005»
15 years 4 months ago
ParPEST: a pipeline for EST data analysis based on parallel computing
Background: Expressed Sequence Tags (ESTs) are short and error-prone DNA sequences generated from the 5' and 3' ends of randomly selected cDNA clones. They provide an im...
Nunzio D'Agostino, Mario Aversano, Maria Luisa Chi...
BMCBI
2004
131views more  BMCBI 2004»
15 years 4 months ago
Alternative mapping of probes to genes for Affymetrix chips
Background: Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the...
Laurent Gautier, Morten Møller, Lennart Fri...
IPM
2002
106views more  IPM 2002»
15 years 4 months ago
A feature mining based approach for the classification of text documents into disjoint classes
This paper proposes a new approach for classifying text documents into two disjoint classes. The new approach is based on extracting patterns, in the form of two logical expressio...
Salvador Nieto Sánchez, Evangelos Triantaph...
ICLP
2010
Springer
15 years 2 months ago
A Framework for Verification and Debugging of Resource Usage Properties: Resource Usage Verification
We present a framework for (static) verification of general resource usage program properties. The framework extends the criteria of correctness as the conformance of a program to ...
Pedro López-García, Luthfi Darmawan,...