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BMCBI
2006
135views more  BMCBI 2006»
15 years 1 months ago
TF Target Mapper: A BLAST search tool for the identification of Transcription Factor target genes
Background: In the current era of high throughput genomics a major challenge is the genome-wide identification of target genes for specific transcription factors. Chromatin immuno...
Sebastiaan Horsman, Michael J. Moorhouse, Victor C...
BMCBI
2007
169views more  BMCBI 2007»
15 years 1 months ago
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
Background: In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in ...
Ibtissem Grissa, Gilles Vergnaud, Christine Pource...
BMCBI
2010
161views more  BMCBI 2010»
15 years 1 months ago
GeneMesh: a web-based microarray analysis tool for relating differentially expressed genes to MeSH terms
Background: An important objective of DNA microarray-based gene expression experimentation is determining interrelationships that exist between differentially expressed genes and ...
Saurin D. Jani, Gary L. Argraves, Jeremy L. Barth,...
BMCBI
2006
115views more  BMCBI 2006»
15 years 1 months ago
SimArray: a user-friendly and user-configurable microarray design tool
Background: Microarrays were first developed to assess gene expression but are now also used to map protein-binding sites and to assess allelic variation between individuals. Rega...
Richard P. Auburn, Roslin R. Russell, Bettina Fisc...
SCFBM
2008
138views more  SCFBM 2008»
15 years 28 days ago
Epigrass: a tool to study disease spread in complex networks
Background: The construction of complex spatial simulation models such as those used in network epidemiology, is a daunting task due to the large amount of data involved in their ...
Flávio C. Coelho, Oswaldo G. Cruz, Cl&aacut...