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» Tools for visually exploring biological networks
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IJCNN
2006
IEEE
15 years 3 months ago
An Architecture for Object-based Saccade Generation using a Biologically Inspired Self-organised Retina
— Our paper presents a fully automated computational mechanism for targeting a space-variant retina based on the highlevel visual content of a scene. Our retina’s receptive fie...
Sanjeeva Balasuriya, Paul Siebert
88
Voted
TVCG
2008
119views more  TVCG 2008»
14 years 9 months ago
Exploration of Networks using overview+detail with Constraint-based cooperative layout
A standard approach to large network visualization is to provide an overview of the network and a detailed view of a small component of the graph centred around a focal node. The u...
Tim Dwyer, Kim Marriott, Falk Schreiber, Peter J. ...
BIB
2010
129views more  BIB 2010»
14 years 9 months ago
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...
86
Voted
GECCO
2008
Springer
261views Optimization» more  GECCO 2008»
14 years 10 months ago
SSNNS -: a suite of tools to explore spiking neural networks
We are interested in engineering smart machines that enable backtracking of emergent behaviors. Our SSNNS simulator consists of hand-picked tools to explore spiking neural network...
Heike Sichtig, J. David Schaffer, Craig B. Laramee
BMCBI
2008
133views more  BMCBI 2008»
14 years 9 months ago
SPIKE - a database, visualization and analysis tool of cellular signaling pathways
Background: Biological signaling pathways that govern cellular physiology form an intricate web of tightly regulated interlocking processes. Data on these regulatory networks are ...
Ran Elkon, Rita Vesterman, Nira Amit, Igor Ulitsky...