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BMCBI
2010
150views more  BMCBI 2010»
15 years 2 months ago
Systematic calibration of a cell signaling network model
Background: Mathematical modeling is being applied to increasingly complex biological systems and datasets; however, the process of analyzing and calibrating against experimental ...
Kyoung Ae Kim, Sabrina L. Spencer, John G. Albeck,...
125
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BMCBI
2010
117views more  BMCBI 2010»
15 years 2 months ago
New decoding algorithms for Hidden Markov Models using distance measures on labellings
Background: Existing hidden Markov model decoding algorithms do not focus on approximately identifying the sequence feature boundaries. Results: We give a set of algorithms to com...
Daniel G. Brown 0001, Jakub Truszkowski
BMCBI
2008
228views more  BMCBI 2008»
15 years 2 months ago
Adaptive diffusion kernel learning from biological networks for protein function prediction
Background: Machine-learning tools have gained considerable attention during the last few years for analyzing biological networks for protein function prediction. Kernel methods a...
Liang Sun, Shuiwang Ji, Jieping Ye
CORR
2008
Springer
154views Education» more  CORR 2008»
15 years 2 months ago
Sponsored Search Auctions with Markovian Users
Abstract. Sponsored search involves running an auction among advertisers who bid in order to have their ad shown next to search results for specific keywords. The most popular auct...
Gagan Aggarwal, Jon Feldman, S. Muthukrishnan, Mar...
DSS
2008
103views more  DSS 2008»
15 years 2 months ago
Explaining clinical decisions by extracting regularity patterns
When solving clinical decision-making problems with modern graphical decision-theoretic models such as influence diagrams, we obtain decision tables with optimal decision alternat...
Concha Bielza, Juan A. Fernández del Pozo, ...