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» Topological Analysis of Refinement
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BMCBI
2011
14 years 2 months ago
Combinatorial analysis and algorithms for quasispecies reconstruction using next-generation sequencing
Background: Next-generation sequencing (NGS) offers a unique opportunity for high-throughput genomics and has potential to replace Sanger sequencing in many fields, including de-n...
Mattia C. F. Prosperi, Luciano Prosperi, Alessandr...
BMCBI
2006
95views more  BMCBI 2006»
14 years 11 months ago
A quantitative analysis of secondary RNA structure using domination based parameters on trees
Background: It has become increasingly apparent that a comprehensive database of RNA motifs is essential in order to achieve new goals in genomic and proteomic research. Secondary...
Teresa W. Haynes, Debra J. Knisley, Edith Seier, Y...
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BMCBI
2007
132views more  BMCBI 2007»
14 years 11 months ago
Analysis of probe level patterns in Affymetrix microarray data
Background: Microarrays have been used extensively to analyze the expression profiles for thousands of genes in parallel. Most of the widely used methods for analyzing Affymetrix ...
Alexander C. Cambon, Abdelnaby Khalyfa, Nigel G. F...
RE
2006
Springer
14 years 11 months ago
Interaction Analysis in Aspect-Oriented Models
Aspect-oriented concepts are currently introduced in all phases of the software development life cycle. However, the complexity of interactions among different aspects and between...
Katharina Mehner, Mattia Monga, Gabriele Taentzer
COMPGEOM
2008
ACM
15 years 26 days ago
Towards persistence-based reconstruction in euclidean spaces
Manifold reconstruction has been extensively studied for the last decade or so, especially in two and three dimensions. Recent advances in higher dimensions have led to new method...
Frédéric Chazal, Steve Oudot