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KDD
2002
ACM
197views Data Mining» more  KDD 2002»
16 years 4 months ago
SimRank: a measure of structural-context similarity
The problem of measuring "similarity" of objects arises in many applications, and many domain-specific measures have been developed, e.g., matching text across documents...
Glen Jeh, Jennifer Widom
RECOMB
2003
Springer
16 years 4 months ago
On de novo interpretation of tandem mass spectra for peptide identification
The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder...
Vineet Bafna, Nathan Edwards
RECOMB
2001
Springer
16 years 4 months ago
Class discovery in gene expression data
Recent studies (Alizadeh et al, [1]; Bittner et al,[5]; Golub et al, [11]) demonstrate the discovery of putative disease subtypes from gene expression data. The underlying computa...
Amir Ben-Dor, Nir Friedman, Zohar Yakhini
RECOMB
2001
Springer
16 years 4 months ago
Context-specific Bayesian clustering for gene expression data
The recent growth in genomic data and measurements of genome-wide expression patterns allows us to apply computational tools to examine gene regulation by transcription factors. I...
Yoseph Barash, Nir Friedman
CISIS
2010
IEEE
15 years 11 months ago
Scalability Analysis of Progressive Alignment on a Multicore
—Sequence alignment is a fundamental instrument in Bioinformatics. In recent years, numerous proposals have been addressing the problem of accelerating this class of applications...
Sebastian Isaza, Friman Sánchez, Georgi Gay...