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KDD
2002
ACM
197views Data Mining» more  KDD 2002»
16 years 7 days ago
SimRank: a measure of structural-context similarity
The problem of measuring "similarity" of objects arises in many applications, and many domain-specific measures have been developed, e.g., matching text across documents...
Glen Jeh, Jennifer Widom
RECOMB
2003
Springer
16 years 4 days ago
On de novo interpretation of tandem mass spectra for peptide identification
The correct interpretation of tandem mass spectra is a difficult problem, even when it is limited to scoring peptides against a database. De novo sequencing is considerably harder...
Vineet Bafna, Nathan Edwards
RECOMB
2001
Springer
16 years 4 days ago
Class discovery in gene expression data
Recent studies (Alizadeh et al, [1]; Bittner et al,[5]; Golub et al, [11]) demonstrate the discovery of putative disease subtypes from gene expression data. The underlying computa...
Amir Ben-Dor, Nir Friedman, Zohar Yakhini
RECOMB
2001
Springer
16 years 4 days ago
Context-specific Bayesian clustering for gene expression data
The recent growth in genomic data and measurements of genome-wide expression patterns allows us to apply computational tools to examine gene regulation by transcription factors. I...
Yoseph Barash, Nir Friedman
CISIS
2010
IEEE
15 years 6 months ago
Scalability Analysis of Progressive Alignment on a Multicore
—Sequence alignment is a fundamental instrument in Bioinformatics. In recent years, numerous proposals have been addressing the problem of accelerating this class of applications...
Sebastian Isaza, Friman Sánchez, Georgi Gay...