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» Traceability for System Families
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CRV
2009
IEEE
115views Robotics» more  CRV 2009»
15 years 7 months ago
Learning Model Complexity in an Online Environment
In this paper we introduce the concept and method for adaptively tuning the model complexity in an online manner as more examples become available. Challenging classification pro...
Dan Levi, Shimon Ullman
102
Voted
ICDE
2005
IEEE
134views Database» more  ICDE 2005»
15 years 6 months ago
Index Structures for Matching XML Twigs Using Relational Query Processors
Various index structures have been proposed to speed up the evaluation of XML path expressions. However, existing XML path indices suffer from at least one of three limitations: ...
Zhiyuan Chen, Johannes Gehrke, Flip Korn, Nick Kou...
117
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BMCBI
2005
109views more  BMCBI 2005»
15 years 18 days ago
Automation of gene assignments to metabolic pathways using high-throughput expression data
Background: Accurate assignment of genes to pathways is essential in order to understand the functional role of genes and to map the existing pathways in a given genome. Existing ...
Liviu Popescu, Golan Yona
BMCBI
2004
177views more  BMCBI 2004»
15 years 17 days ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
130
Voted
BMCBI
2010
123views more  BMCBI 2010»
14 years 7 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke