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BMCBI
2010
104views more  BMCBI 2010»
14 years 4 months ago
A systematic study of genome context methods: calibration, normalization and combination
Background: Genome context methods have been introduced in the last decade as automatic methods to predict functional relatedness between genes in a target genome using the patter...
Luciana Ferrer, Joseph M. Dale, Peter D. Karp
BMCBI
2011
14 years 1 months ago
RAG: An Update to the RNA-As-Graphs Resource
Background: In 2004, we presented a web resource for stimulating the search for novel RNAs, RNA-As-Graphs (RAG), which classified, catalogued, and predicted RNA secondary structur...
Joseph A. Izzo, Namhee Kim, Shereef Elmetwaly, Tam...
SDM
2011
SIAM
232views Data Mining» more  SDM 2011»
14 years 9 days ago
A Sequential Dual Method for Structural SVMs
In many real world prediction problems the output is a structured object like a sequence or a tree or a graph. Such problems range from natural language processing to computationa...
Shirish Krishnaj Shevade, Balamurugan P., S. Sunda...
STOC
2005
ACM
184views Algorithms» more  STOC 2005»
15 years 3 months ago
Coresets in dynamic geometric data streams
A dynamic geometric data stream consists of a sequence of m insert/delete operations of points from the discrete space {1, . . . , ∆}d [26]. We develop streaming (1 + )-approxim...
Gereon Frahling, Christian Sohler