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COCOON
2005
Springer
15 years 10 months ago
Perfect Sorting by Reversals
In computational biology, gene order data is often modelled as signed permutations. A classical problem in genome comparison is to detect conserved segments in a permutation, that ...
Marie-France Sagot, Eric Tannier
COMPLIFE
2005
Springer
15 years 10 months ago
MAPPIS: Multiple 3D Alignment of Protein-Protein Interfaces
A protein-protein interface (PPI) is defined by a pair of regions of two interacting protein molecules that are linked by non-covalent bonds. Recognition of conserved 3D patterns ...
Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussi...
HPCC
2005
Springer
15 years 10 months ago
Detonation Structure Simulation with AMROC
Abstract. Numerical simulations can be the key to the thorough understanding of the multi-dimensional nature of transient detonation waves. But the accurate approximation of realis...
Ralf Deiterding
HPCC
2005
Springer
15 years 10 months ago
Factory: An Object-Oriented Parallel Programming Substrate for Deep Multiprocessors
Abstract. Recent advances in processor technology such as Simultaneous Multithreading (SMT) and Chip Multiprocessing (CMP) enable parallel processing on a single die. These process...
Scott Schneider, Christos D. Antonopoulos, Dimitri...
ICS
2005
Tsinghua U.
15 years 10 months ago
Multigrain parallel Delaunay Mesh generation: challenges and opportunities for multithreaded architectures
Given the importance of parallel mesh generation in large-scale scientific applications and the proliferation of multilevel SMTbased architectures, it is imperative to obtain ins...
Christos D. Antonopoulos, Xiaoning Ding, Andrey N....
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