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» Unbiased pattern detection in microarray data series
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BMCBI
2010
88views more  BMCBI 2010»
14 years 9 months ago
Proteome scanning to predict PDZ domain interactions using support vector machines
Background: PDZ domains mediate protein-protein interactions involved in important biological processes through the recognition of short linear motifs in their target proteins. Tw...
Shirley Hui, Gary D. Bader
BMCBI
2011
14 years 4 months ago
Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in i
Background: In the last decades, microarray technology has spread, leading to a dramatic increase of publicly available datasets. The first statistical tools developed were focuse...
Paolo G. V. Martini, Davide Risso, Gabriele Sales,...
WSDM
2012
ACM
245views Data Mining» more  WSDM 2012»
13 years 5 months ago
The early bird gets the buzz: detecting anomalies and emerging trends in information networks
In this work we propose a novel approach to anomaly detection in streaming communication data. We first build a stochastic model for the system based on temporal communication pa...
Brian Thompson
BMCBI
2004
90views more  BMCBI 2004»
14 years 9 months ago
Statistical monitoring of weak spots for improvement of normalization and ratio estimates in microarrays
Background: Several aspects of microarray data analysis are dependent on identification of genes expressed at or near the limits of detection. For example, regression-based normal...
Igor Dozmorov, Nicholas Knowlton, Yuhong Tang, Mic...
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KDD
2010
ACM
199views Data Mining» more  KDD 2010»
15 years 1 months ago
Online discovery and maintenance of time series motifs
The detection of repeated subsequences, time series motifs, is a problem which has been shown to have great utility for several higher-level data mining algorithms, including clas...
Abdullah Mueen, Eamonn J. Keogh