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BMCBI
2004
207views more  BMCBI 2004»
15 years 3 months ago
Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resen
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
Davide Corà, Ferdinando Di Cunto, Paolo Pro...
CANDC
2004
ACM
15 years 3 months ago
The iProClass integrated database for protein functional analysis
Increasingly, scientists have begun to tackle gene functions and other complex regulatory processes by studying organisms at the global scales for various levels of biological org...
Cathy H. Wu, Hongzhan Huang, Anastasia N. Nikolska...
NAR
2002
138views more  NAR 2002»
15 years 3 months ago
The Protein Information Resource: an integrated public resource of functional annotation of proteins
The Protein Information Resource (PIR) serves as an integrated public resource of functional annotation of protein data to support genomic/proteomic research and scientific discov...
Cathy H. Wu, Hongzhan Huang, Leslie Arminski, Jorg...
NAR
2007
135views more  NAR 2007»
15 years 3 months ago
g: Profiler - a web-based toolset for functional profiling of gene lists from large-scale experiments
g:Profiler (http://biit.cs.ut.ee/gprofiler/) is a public web server for characterising and manipulating gene lists resulting from mining high-throughput genomic data. g:Profiler h...
Jüri Reimand, Meelis Kull, Hedi Peterson, Jaa...
CIKM
2010
Springer
15 years 2 months ago
FacetCube: a framework of incorporating prior knowledge into non-negative tensor factorization
Non-negative tensor factorization (NTF) is a relatively new technique that has been successfully used to extract significant characteristics from polyadic data, such as data in s...
Yun Chi, Shenghuo Zhu