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ASPLOS
2009
ACM
16 years 3 months ago
GPU acceleration of a production molecular docking code
Abstract: Modeling the interactions of biological molecules, or docking, is critical to both understanding basic life processes and to designing new drugs. Here we describe the GPU...
Bharat Sukhwani, Martin C. Herbordt
STOC
2003
ACM
136views Algorithms» more  STOC 2003»
16 years 3 months ago
Alpha-shapes and flow shapes are homotopy equivalent
In this paper we establish a topological similarity between two apparently different shape constructors from a set of points. Shape constructors are geometric structures that tran...
Tamal K. Dey, Joachim Giesen, Matthias John
GECCO
2007
Springer
210views Optimization» more  GECCO 2007»
15 years 9 months ago
Markov chain models of bare-bones particle swarm optimizers
We apply a novel theoretical approach to better understand the behaviour of different types of bare-bones PSOs. It avoids many common but unrealistic assumptions often used in an...
Riccardo Poli, William B. Langdon
LPNMR
2007
Springer
15 years 9 months ago
On the Effectiveness of Looking Ahead in Search for Answer Sets
Abstract. Most complete answer set solvers are based on DPLL. One of the constraint propagation methods is the so-called lookahead, which has been somewhat controversial, due to it...
Guohua Liu, Jia-Huai You
ICMCS
2005
IEEE
138views Multimedia» more  ICMCS 2005»
15 years 8 months ago
Overcomplete ICA-based Manmade Scene Classification
Principal Component Analysis (PCA) has been widely used to extract features for pattern recognition problems such as object recognition. Oliva and Torralba used “spatial envelop...
Matthew Boutell, Jiebo Luo