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BMCBI
2010
121views more  BMCBI 2010»
14 years 7 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...
BMCBI
2011
14 years 4 months ago
Accurate statistics for local sequence alignment with position-dependent scoring by rare-event sampling
Background: Molecular database search tools need statistical models to assess the significance for the resulting hits. In the classical approach one asks the question how probable...
Stefan Wolfsheimer, Inke Herms, Sven Rahmann, Alex...
BMCBI
2011
14 years 4 months ago
Detection of viral sequence fragments of HIV-1 subfamilies yet unknown
Background: Methods of determining whether or not any particular HIV-1 sequence stems - completely or in part - from some unknown HIV-1 subtype are important for the design of vac...
Thomas Unterthiner, Anne-Kathrin Schultz, Jan Bull...
ECCC
2011
188views ECommerce» more  ECCC 2011»
14 years 4 months ago
Three Query Locally Decodable Codes with Higher Correctness Require Exponential Length
Locally decodable codes are error correcting codes with the extra property that, in order to retrieve the correct value of just one position of the input with high probability, it...
Anna Gál, Andrew Mills
CORR
2010
Springer
139views Education» more  CORR 2010»
14 years 4 months ago
On Communication over Unknown Sparse Frequency-Selective Block-Fading Channels
The problem of reliable communication over unknown frequency-selective block-fading channels with sparse impulse responses is considered. In particular, discrete-time impulse respo...
Arun Pachai Kannu, Philip Schniter