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BMCBI
2010
189views more  BMCBI 2010»
15 years 3 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
CORR
2010
Springer
95views Education» more  CORR 2010»
15 years 3 months ago
Performance evaluation for ML sequence detection in ISI channels with Gauss Markov Noise
Inter-symbol interference (ISI) channels with data dependent Gauss Markov noise have been used to model read channels in magnetic recording and other data storage systems. The Vite...
Naveen Kumar, Aditya Ramamoorthy, Murti V. Salapak...
BMCBI
2006
99views more  BMCBI 2006»
15 years 3 months ago
A proposed metric for assessing the measurement quality of individual microarrays
Background: High-density microarray technology is increasingly applied to study gene expression levels on a large scale. Microarray experiments rely on several critical steps that...
Kyoungmi Kim, Grier P. Page, T. Mark Beasley, Step...
BMCBI
2007
115views more  BMCBI 2007»
15 years 3 months ago
Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets
Background: In structural genomics, an important goal is the detection and classification of protein–protein interactions, given the structures of the interacting partners. We h...
Guillaume Launay, Raul Mendez, Shoshana J. Wodak, ...
PAMI
2008
134views more  PAMI 2008»
15 years 3 months ago
Bittracker - A Bitmap Tracker for Visual Tracking under Very General Conditions
This paper addresses the problem of visual tracking under very general conditions: a possibly nonrigid target whose appearance may drastically change over time, general camera moti...
Ido Leichter, Michael Lindenbaum, Ehud Rivlin
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