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NAR
2011
256views Computer Vision» more  NAR 2011»
14 years 7 months ago
ModBase, a database of annotated comparative protein structure models, and associated resources
ModBase (http://salilab.org/modbase) is a database of annotated comparative protein structure models. The models are calculated by ModPipe, an automated modeling pipeline that rel...
Ursula Pieper, Benjamin M. Webb, David T. Barkan, ...
ICWE
2010
Springer
15 years 9 months ago
A Visual Tool for Rapid Integration of Enterprise Software Applications
: © A visual tool for rapid integration of enterprise software applications Inbal Marhaim, Eli Mordechai, Claudio Bartolini, Ruth Bergman, Oren Ariel, Christopher Peltz HP Laborat...
Inbal Marhaim, Eli Mordechai, Claudio Bartolini, R...
BMCBI
2008
125views more  BMCBI 2008»
15 years 4 months ago
XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
Background: Advances in automated DNA sequencing technology have accelerated the generation of metagenomic DNA sequences, especially environmental ribosomal RNA gene (rDNA) sequen...
Daniel N. Frank
BMCBI
2006
179views more  BMCBI 2006»
15 years 4 months ago
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
QEST
2009
IEEE
15 years 11 months ago
Recent Extensions to Traviando
—Traviando is a trace analyzer and visualizer for simulation traces of discrete event dynamic systems. In this paper, we briefly outline recent extensions of Traviando towards a...
Peter Kemper
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