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BMCBI
2006
114views more  BMCBI 2006»
14 years 11 months ago
A high level interface to SCOP and ASTRAL implemented in Python
Background: Benchmarking algorithms in structural bioinformatics often involves the construction of datasets of proteins with given sequence and structural properties. The SCOP da...
James A. Casbon, Gavin E. Crooks, Mansoor A. S. Sa...
BMCBI
2006
144views more  BMCBI 2006»
14 years 11 months ago
Association algorithm to mine the rules that govern enzyme definition and to classify protein sequences
Background: The number of sequences compiled in many genome projects is growing exponentially, but most of them have not been characterized experimentally. An automatic annotation...
Shih-Hau Chiu, Chien-Chi Chen, Gwo-Fang Yuan, Thy-...
KR
2004
Springer
15 years 4 months ago
Historical Remarks on Nonmonotonic Reasoning, Especially Circumscription
Humans have always done nonmonotonic reasoning, but rigorous monotonic reasoning in reaching given conclusions has been deservedly more respected and admired. Euclid contains the ...
John McCarthy
93
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WWW
2005
ACM
16 years 2 days ago
Gimme' the context: context-driven automatic semantic annotation with C-PANKOW
Without the proliferation of formal semantic annotations, the Semantic Web is certainly doomed to failure. In earlier work we presented a new paradigm to avoid this: the 'Sel...
Günter Ladwig, Philipp Cimiano, Steffen Staab
KDD
2008
ACM
183views Data Mining» more  KDD 2008»
15 years 11 months ago
Structured entity identification and document categorization: two tasks with one joint model
Traditionally, research in identifying structured entities in documents has proceeded independently of document categorization research. In this paper, we observe that these two t...
Indrajit Bhattacharya, Shantanu Godbole, Sachindra...