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CMSB
2007
Springer
15 years 3 months ago
A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets
We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which unifies the qualitative, stochastic and continuous paradigms. Each per...
David Gilbert, Monika Heiner, Sebastian Lehrack
ESEC
1997
Springer
15 years 1 months ago
A View-Oriented Approach to System Modelling Based on Graph Transformation
The idea of a combined reference model- and view-based specification approach has been proposed recently in the software engineering community. In this paper we present a specifica...
Gregor Engels, Reiko Heckel, Gabriele Taentzer, Ha...
BMCBI
2006
119views more  BMCBI 2006»
14 years 9 months ago
Evaluation of microarray data normalization procedures using spike-in experiments
Background: Recently, a large number of methods for the analysis of microarray data have been proposed but there are few comparisons of their relative performances. By using so-ca...
Patrik Rydén, Henrik Andersson, Mattias Lan...
ADBIS
2009
Springer
143views Database» more  ADBIS 2009»
15 years 4 months ago
Cost-Based Vectorization of Instance-Based Integration Processes
The inefficiency of integration processes—as an abstraction of workflow-based integration tasks—is often reasoned by low resource utilization and significant waiting times f...
Matthias Böhm, Dirk Habich, Steffen Preissler...
CORR
2007
Springer
127views Education» more  CORR 2007»
14 years 9 months ago
Attribute Exploration of Discrete Temporal Transitions
Discrete temporal transitions occur in a variety of domains, but this work is mainly motivated by applications in molecular biology: explaining and analyzing observed transcriptome...
Johannes Wollbold