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» Using Multiple Alignments to Improve Gene Prediction
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BMCBI
2010
110views more  BMCBI 2010»
15 years 5 months ago
GenHtr: a tool for comparative assessment of genetic heterogeneity in microbial genomes generated by massive short-read sequenci
Background: Microevolution is the study of short-term changes of alleles within a population and their effects on the phenotype of organisms. The result of the below-species-level...
GongXin Yu
BMCBI
2004
114views more  BMCBI 2004»
15 years 5 months ago
Profiled support vector machines for antisense oligonucleotide efficacy prediction
Background: This paper presents the use of Support Vector Machines (SVMs) for prediction and analysis of antisense oligonucleotide (AO) efficacy. The collected database comprises ...
Gustavo Camps-Valls, Alistair M. Chalk, Antonio J....
BMCBI
2005
75views more  BMCBI 2005»
15 years 5 months ago
Prediction of a common structural scaffold for proteasome lid, COP9-signalosome and eIF3 complexes
Background: The 'lid' subcomplex of the 26S proteasome and the COP9 signalosome (CSN complex) share a common architecture consisting of six subunits harbouring a so-call...
Hartmut Scheel, Kay Hofmann
ISMIR
2005
Springer
171views Music» more  ISMIR 2005»
15 years 11 months ago
Finding Meter in Music Using An Autocorrelation Phase Matrix and Shannon Entropy
This paper introduces a novel way to detect metrical structure in music. We introduce a way to compute autocorrelation such that the distribution of energy in phase space is prese...
Douglas Eck, Norman Casagrande
EUROPAR
2006
Springer
15 years 9 months ago
Hierarchical Model Validation of Symbolic Performance Models of Scientific Kernels
Multi-resolution validation of hierarchical performance models of scientific applications is critical primarily for two reasons. First, the step-by-step validation determines the c...
Sadaf R. Alam, Jeffrey S. Vetter