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BMCBI
2006
128views more  BMCBI 2006»
14 years 11 months ago
Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it
Background: The proliferation of data repositories in bioinformatics has resulted in the development of numerous interfaces that allow scientists to browse, search and analyse the...
Kevin L. Garwood, Christopher Garwood, Cornelia He...
SIGMOD
2010
ACM
196views Database» more  SIGMOD 2010»
15 years 3 months ago
Connected substructure similarity search
Substructure similarity search is to retrieve graphs that approximately contain a given query graph. It has many applications, e.g., detecting similar functions among chemical com...
Haichuan Shang, Xuemin Lin, Ying Zhang, Jeffrey Xu...
BMCBI
2005
123views more  BMCBI 2005»
14 years 11 months ago
PSI-BLAST-ISS: an intermediate sequence search tool for estimation of the position-specific alignment reliability
Background: Protein sequence alignments have become indispensable for virtually any evolutionary, structural or functional study involving proteins. Modern sequence search and com...
Mindaugas Margelevicius, Ceslovas Venclovas
CIKM
2008
Springer
15 years 1 months ago
SNIF TOOL: sniffing for patterns in continuous streams
Continuous time-series sequence matching, specifically, matching a numeric live stream against a set of predefined pattern sequences, is critical for domains ranging from fire spr...
Abhishek Mukherji, Elke A. Rundensteiner, David C....
BMCBI
2008
158views more  BMCBI 2008»
14 years 11 months ago
Analyzing M-CSF dependent monocyte/macrophage differentiation: Expression modes and meta-modes derived from an independent compo
Background: The analysis of high-throughput gene expression data sets derived from microarray experiments still is a field of extensive investigation. Although new approaches and ...
Dominik Lutter, Peter Ugocsai, Margot Grandl, Evel...