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BMCBI
2004
140views more  BMCBI 2004»
14 years 9 months ago
What can we learn from noncoding regions of similarity between genomes?
Background: In addition to known protein-coding genes, large amounts of apparently non-coding sequence are conserved between the human and mouse genomes. It seems reasonable to as...
Thomas A. Down, Tim J. P. Hubbard
CBMS
2008
IEEE
15 years 4 months ago
ProtCV: A Tool for Extracting, Visualizing and Validating Protein Clusters Using Mass Spectra Peak-Lists
We present ProtCV (Protein Clustering and Visualization) a new software tool for grouping samples (mass spectra peak-lists) emanating from a high throughput proteomics analysis ba...
Stavroula Ventoura, Eugenia G. Giannopoulou, Elias...
BMCBI
2010
114views more  BMCBI 2010»
14 years 9 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
SIGIR
2010
ACM
15 years 1 months ago
Query similarity by projecting the query-flow graph
Defining a measure of similarity between queries is an interesting and difficult problem. A reliable query-similarity measure can be used in a variety of applications such as que...
Ilaria Bordino, Carlos Castillo, Debora Donato, Ar...
ICPR
2002
IEEE
15 years 2 months ago
Extracting Fractal Features for Analyzing Protein Structure
This paper is concerned with the development of a computational methodology based on fractal geometry for determining 3D structure of protein with imagery projection operations. I...
Yu Tao, Thomas R. Ioerger, James C. Sacchettini