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» Using Slicing to Identify Duplication in Source Code
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BMCBI
2010
108views more  BMCBI 2010»
14 years 7 months ago
BIGSdb: Scalable analysis of bacterial genome variation at the population level
Background: The opportunities for bacterial population genomics that are being realised by the application of parallel nucleotide sequencing require novel bioinformatics platforms...
Keith A. Jolley, Martin C. J. Maiden
99
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BMCBI
2011
14 years 4 months ago
SNPPicker: High quality tag SNP selection across multiple populations
Background: Linkage Disequilibrium (LD) bin-tagging algorithms identify a reduced set of tag SNPs that can capture the genetic variation in a population without genotyping every s...
Hugues Sicotte, David N. Rider, Gregory A. Poland,...
89
Voted
MSR
2006
ACM
15 years 3 months ago
Mining large software compilations over time: another perspective of software evolution
With the success of libre (free, open source) software, a new type of software compilation has become increasingly common. Such compilations, often referred to as ‘distributions...
Gregorio Robles, Jesús M. González-B...
BMCBI
2006
97views more  BMCBI 2006»
14 years 9 months ago
REEF: searching REgionally Enriched Features in genomes
Background: In Eukaryotic genomes, different features including genes are not uniformly distributed. The integration of annotation information and genomic position of functional D...
Alessandro Coppe, Gian Antonio Danieli, Stefania B...
SOSP
2007
ACM
15 years 6 months ago
Triage: diagnosing production run failures at the user's site
Diagnosing production run failures is a challenging yet important task. Most previous work focuses on offsite diagnosis, i.e. development site diagnosis with the programmers prese...
Joseph Tucek, Shan Lu, Chengdu Huang, Spiros Xanth...