Sciweavers

1251 search results - page 197 / 251
» Using Visualization to Debug Visualization Software
Sort
View
140
Voted
BMCBI
2010
164views more  BMCBI 2010»
15 years 2 months ago
Flexible network reconstruction from relational databases with Cytoscape and CytoSQL
Background: Molecular interaction networks can be efficiently studied using network visualization software such as Cytoscape. The relevant nodes, edges and their attributes can be...
Kris Laukens, Jens Hollunder, Thanh Hai Dang, Geer...
104
Voted
BMCBI
2008
124views more  BMCBI 2008»
15 years 2 months ago
RPPAML/RIMS: A metadata format and an information management system for reverse phase protein arrays
Background: Reverse Phase Protein Arrays (RPPA) are convenient assay platforms to investigate the presence of biomarkers in tissue lysates. As with other high-throughput technolog...
Romesh Stanislaus, Mark Carey, Helena F. Deus, Kev...
130
Voted
BMCBI
2005
124views more  BMCBI 2005»
15 years 2 months ago
ErmineJ: Tool for functional analysis of gene expression data sets
Background: It is common for the results of a microarray study to be analyzed in the context of biologically-motivated groups of genes such as pathways or Gene Ontology categories...
Homin K. Lee, William Braynen, Kiran Keshav, Paul ...
SEFM
2009
IEEE
15 years 9 months ago
Specifying Interacting Components with Coordinated Concurrent Scenarios
Abstract. We introduce a visual notation for local specification of concurrent components based on message sequence charts (MSCs). Each component is a finite-state machine whose ...
Prakash Chandrasekaran, Madhavan Mukund
107
Voted
UIST
2009
ACM
15 years 9 months ago
Relaxed selection techniques for querying time-series graphs
Time-series graphs are often used to visualize phenomena that change over time. Common tasks include comparing values at different points in time and searching for specified patte...
Christian Holz, Steven Feiner