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BMCBI
2002
137views more  BMCBI 2002»
15 years 2 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
NAR
2007
95views more  NAR 2007»
15 years 2 months ago
VisANT 3.0: new modules for pathway visualization, editing, prediction and construction
With the integration of the KEGG and Predictome databases as well as two search engines for coexpressed genes/proteins using data sets obtained from the Stanford Microarray Databa...
Zhenjun Hu, David M. Ng, Takuji Yamada, Chunnuan C...
GIS
2010
ACM
15 years 1 months ago
Ontuition: intuitive data exploration via ontology navigation
We present Ontuition, a system for mapping ontologies. Transforming data to a usable format for Ontuition involves recognizing and resolving data values corresponding to concepts ...
Marco D. Adelfio, Michael D. Lieberman, Hanan Same...
COLING
2010
14 years 10 months ago
Cloud Computing for Linguists
The system presented is a web application designed to aid linguistic research with data collection and online publishing. It is a service mainly for linguists and language experts...
Dorothee Beermann, Pavel Mihaylov
WWW
2007
ACM
16 years 3 months ago
Dynamic personalized pagerank in entity-relation graphs
Extractors and taggers turn unstructured text into entityrelation (ER) graphs where nodes are entities (email, paper, person, conference, company) and edges are relations (wrote, ...
Soumen Chakrabarti