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IPPS
2006
IEEE
15 years 3 months ago
Parallel implementation and performance characterization of MUSCLE
Multiple sequence alignment is a fundamental and very computationally intensive task in molecular biology. MUSCLE, a new algorithm for creating multiple alignments of protein sequ...
Xi Deng, Eric Li, Jiulong Shan, Wenguang Chen
SBACPAD
2007
IEEE
91views Hardware» more  SBACPAD 2007»
15 years 3 months ago
Impacts of Multiprocessor Configurations on Workloads in Bioinformatics
Bioinformatics is among the most active research areas in computer science. In this study, we investigate a suite of workloads in bioinformatics on two multiprocessor systems with...
Youfeng Wu, Mauricio Breternitz Jr., Victor Ying
IPPS
2005
IEEE
15 years 3 months ago
Programming Configurable Multiprocessors
A new high performance computation technique involving multiple processors on a single silicon die is quickly gaining popularity. This new design approach provides very high perfo...
Steven A. Guccione
SIGOPS
2010
179views more  SIGOPS 2010»
14 years 4 months ago
Online cache modeling for commodity multicore processors
Modern chip-level multiprocessors (CMPs) contain multiple processor cores sharing a common last-level cache, memory interconnects, and other hardware resources. Workloads running ...
Richard West, Puneet Zaroo, Carl A. Waldspurger, X...
ICCAD
1999
IEEE
84views Hardware» more  ICCAD 1999»
15 years 1 months ago
Power minimization using system-level partitioning of applications with quality of service requirements
Design systems to provide various quality of service (QoS) guarantees has received a lot of attentions due to the increasing popularity of real-time multimedia and wireless commun...
Gang Qu, Miodrag Potkonjak