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» Using context to improve protein domain identification
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RECOMB
2003
Springer
15 years 10 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona
BMCBI
2006
117views more  BMCBI 2006»
14 years 10 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
CSB
2004
IEEE
177views Bioinformatics» more  CSB 2004»
15 years 1 months ago
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment
One goal of the structural genomics initiative is the identification of new protein folds. Sequence-based structural homology prediction methods are an important means for priorit...
Christopher James Langmead, Bruce Randall Donald
LREC
2010
190views Education» more  LREC 2010»
14 years 11 months ago
Applying a Dynamic Bayesian Network Framework to Transliteration Identification
Identification of transliterations is aimed at enriching multilingual lexicons and improving performance in various Natural Language Processing (NLP) applications including Cross ...
Peter Nabende
BMCBI
2008
153views more  BMCBI 2008»
14 years 10 months ago
2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments
Background: The amount of information stemming from proteomics experiments involving (multi dimensional) separation techniques, mass spectrometric analysis, and computational anal...
Jens Allmer, Sebastian Kuhlgert, Michael Hippler