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» Using context to improve protein domain identification
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DIS
2005
Springer
15 years 3 months ago
Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain
In this paper, the semantic relationships between a predicate and its arguments in terms of semantic roles are employed to improve lexical-based named entity recognition (NER) in t...
Tuangthong Wattarujeekrit, Nigel Collier
SIGIR
2010
ACM
14 years 8 months ago
Incorporating global information into named entity recognition systems using relational context
The state-of-the-art in Named Entity Recognition relies on a combination of local features of the text and global knowledge to determine the types of the recognized entities. This...
Yuval Merhav, Filipe de Sá Mesquita, Denils...
BMCBI
2004
144views more  BMCBI 2004»
14 years 9 months ago
GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes
Background: The function of a novel gene product is typically predicted by transitive assignment of annotation from similar sequences. We describe a novel method, GOtcha, for pred...
David M. A. Martin, Matthew Berriman, Geoffrey J. ...
BMCBI
2011
14 years 1 months ago
PI: An open-source software package for validation of the SEQUEST result and visualization of mass spectrum
Background: Tandem mass spectrometry (MS/MS) has emerged as the leading method for high- throughput protein identification in proteomics. Recent technological breakthroughs have d...
Yantao Qiao, Hong Zhang, Dongbo Bu, Shiwei Sun
LREC
2010
140views Education» more  LREC 2010»
14 years 11 months ago
mwetoolkit: a Framework for Multiword Expression Identification
This paper presents the Multiword Expression Toolkit (mwetoolkit), an environment for type and language-independent MWE identification from corpora. The mwetoolkit provides a targ...
Carlos Ramisch, Aline Villavicencio, Christian Boi...