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» Using context to improve protein domain identification
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KDD
2002
ACM
104views Data Mining» more  KDD 2002»
15 years 10 months ago
Generalization Methods in Bioinformatics
Protein secondary structure prediction and high-throughput drug screen data mining are two important applications in bioinformatics. The data is represented in sparse feature spac...
Steven Eschrich, Nitesh V. Chawla, Lawrence O. Hal...
BMCBI
2006
143views more  BMCBI 2006»
14 years 10 months ago
Fast estimation of the difference between two PAM/JTT evolutionary distances in triplets of homologous sequences
Background: The estimation of the difference between two evolutionary distances within a triplet of homologs is a common operation that is used for example to determine which of t...
Christophe Dessimoz, Manuel Gil, Adrian Schneider,...
EMNLP
2007
14 years 11 months ago
A Topic Model for Word Sense Disambiguation
We develop latent Dirichlet allocation with WORDNET (LDAWN), an unsupervised probabilistic topic model that includes word sense as a hidden variable. We develop a probabilistic po...
Jordan L. Boyd-Graber, David M. Blei, Xiaojin Zhu
BMCBI
2007
89views more  BMCBI 2007»
14 years 10 months ago
Primique: automatic design of specific PCR primers for each sequence in a family
Background: In many contexts, researchers need specific primers for all sequences in a family such that each primer set amplifies only its target sequence and none of the others, ...
Jakob Fredslund, Mette Lange
MTA
2006
140views more  MTA 2006»
14 years 10 months ago
Audio indexing: primary components retrieval
This work addresses the soundtrack indexing of multimedia documents. We present and merge two audio classification tools that we have developed. The first one, a speech music clas...
Julien Pinquier, Régine André-Obrech...