The paper presents the abstraction transformation which is a fundaethod for creating functions in ADATE. The use of abstraction turns out to be similar to evolution by gene duplic...
Two binary-encoded models describing some aspects of the coevolution between an artificial immune system and a set of antigens have been proposed and analyzed. The first model ha...
Abstract. In this work, a Simulated Annealing (SA) algorithm is proposed for a Metabolic Engineering task: the optimization of the set of gene deletions to apply to a microbial str...
—In metabolic engineering it is difficult to identify which set of genetic manipulations will result in a microbial strain that achieves a desired production goal, due to the co...
Abstract. The existing synteny block reconstruction algorithms use anchors (e.g., orthologous genes) shared over all genomes to construct the synteny blocks for multiple genomes. T...
Qian Peng, Max A. Alekseyev, Glenn Tesler, Pavel A...