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» Using information about functions in selecting test cases
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BMCBI
2007
112views more  BMCBI 2007»
14 years 11 months ago
Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
Background: Gene clustering has been widely used to group genes with similar expression pattern in microarray data analysis. Subsequent enrichment analysis using predefined gene s...
Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong ...
BMCBI
2006
172views more  BMCBI 2006»
14 years 11 months ago
Prediction of cis/trans isomerization in proteins using PSI-BLAST profiles and secondary structure information
Background: The majority of peptide bonds in proteins are found to occur in the trans conformation. However, for proline residues, a considerable fraction of Prolyl peptide bonds ...
Jiangning Song, Kevin Burrage, Zheng Yuan, Thomas ...
COLT
2006
Springer
15 years 3 months ago
Maximum Entropy Distribution Estimation with Generalized Regularization
Abstract. We present a unified and complete account of maximum entropy distribution estimation subject to constraints represented by convex potential functions or, alternatively, b...
Miroslav Dudík, Robert E. Schapire
JIPS
2010
159views more  JIPS 2010»
14 years 6 months ago
A Dynamic Approach to Estimate Change Impact using Type of Change Propagation
Software evolution is an ongoing process carried out with the aim of extending base applications either for adding new functionalities or for adapting software to changing environm...
Chetna Gupta, Yogesh Singh, Durg Singh Chauhan
ECIR
2010
Springer
15 years 1 months ago
A Case for Automatic System Evaluation
Ranking a set retrieval systems according to their retrieval effectiveness without relying on relevance judgments was first explored by Soboroff et al. [13]. Over the years, a numb...
Claudia Hauff, Djoerd Hiemstra, Leif Azzopardi, Fr...